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Plant Pathology and Microbiology

Plant Pathology and Microbiology / Dr. Roger Wise

Dr. Roger Wise

  Dr. Roger Wise
Professor - USDA Collaborator

411 Bessey Hall
Iowa State University
Ames, IA 50011
Phone: 515-294-9756

 
Lab homepage
  http://wiselab.org/
 
Educational Background
 

B.S., Physiology, Michigan State University
Ph.D., Genetics, Michigan State University
Postdoctoral, Molecular Biology, University of Florida           
Postdoctoral, Molecular Biology, Max-Planck-Institut, Köln, Germany
 

 
Research Areas
 

Genetics
Genomics
Bioinformatics
Molecular Biology

 
Publications
 

Dash, S, J Van Hemert, L Hong, RP Wise, and JA Dickerson. 2012. PLEXdb: gene expression resources for plants and plant pathogens. Nucleic Acids Research (2012) 40 (D1): D1194-D1201. doi: 10.1093/nar/gkr938.

Meyer, J, D Pei, and RP Wise. 2011. Rf8-mediated T-urf13 transcript accumulation coincides with a pentatricopeptide repeat cluster on maize chromosome 2L. The Plant Genome 4(3): 283-299.

Moscou, MJ, N Lauter, RA Caldo, D Nettleton, and RP Wise. 2011. Quantitative and temporal definition of the Mla transcriptional regulon during barley-powdery mildew interactions. Mol Plant Microbe Interactions 24:6, 694-705 DOI: 10.1094/MPMI-09-10-0211.

Moscou, MJ, N Lauter, B Steffenson, and RP Wise.. 2011. Quantitative and qualitative stem rust resistance factors in barley are associated with transcriptional repression of defense regulons. PLoS Genetics 7(7): e1002208. doi:10.1371/journal.pgen.1002208.

Xi, L, MJ Moscou, Y Meng, W Xu, RA Caldo, M Shaver, D Nettleton, and RP Wise. 2009. Transcript-based cloning of RRP46, a regulator of rRNA processing and R-gene-independent cell death in barley – powdery mildew interactions. The Plant Cell 21(10): 3280–3295.

Kronmiller BA and RP Wise. 2009. Computational finishing of large sequence contigs reveals interspersed nested repeats and gene islands in the rf1-associated region of maize. Plant Physiology 151:483-95.

Meng, Y, MJ Moscou and RP Wise. 2009. Blufensin1 negatively impacts basal defense in response to barley powdery mildew. Plant Physiology 149: 271-285.

Hu, P, Y Meng, and RP Wise. 2009. Functional contribution of chorismate synthase, anthranilate synthase, and chorismate mutase to penetration resistance in barley-powdery mildew interactions. Mol Plant-Microbe Interactions 22(3): 311-320.

Schreiber A, T Sutton, R Caldo, E Kalashyan, B Lovell, G Mayo, G Muehlbauer, A Druka, R Waugh, RP Wise, P Langridge, and U Baumann. 2009. Comparative transcriptomics in the Triticeae. BMC Genomics 10:285

Potokina, E, A Druka, Z Luo, M Moscou, R Wise, R Waugh, and M Kearsey. 2008. Tissue-dependent limited pleiotropy affects gene expression in barley. Plant Journal 56(2): 287-296.

Kronmiller, BA and RP Wise. 2008. TEnest: Automated chronological annotation and visualization of maize nested transposable elements. Plant Physiology 146: 45-59. 

Potokina, E, A Druka, ZW Luo, R Wise, R Waugh, and MJ Kearsey. 2008. eQTL analysis of 16,000 barley genes reveals a complex pattern of genome wide transcriptional regulation. The Plant Journal 53(1): 90-101.

Wise, RP, MJ Moscou, AJ Bogdanove, and SA Whitham. 2007. Transcript Profiling in Host – Pathogen Interactions. Ann. Review of Phytopathology 45: 329-369.

Caldo RA, D Nettleton, J Peng, and RP Wise. 2006. Stage-specific suppression of basal defense discriminates barley plants containing fast- and delayed-acting Mla powdery mildew resistance alleles. Molecular Plant-Microbe Interactions 19(9): 939-947.

Druka, A, G Muehlbauer, I Druka, R Caldo, U Baumann, N Rostoks, A Schreiber, R Wise, T Close, A Kleinhofs, A Graner, A Schulman, P Langridge, K Sato, P Hayes, J McNicol, D Marshall and R Waugh. 2006. An atlas of gene expression from seed to seed through barley development. Functional and Integrative Genomics 6: 202-211.

Halterman, DA and RP Wise. 2006. Upstream open reading frames of the barley Mla13 powdery mildew resistance gene function co-operatively to down-regulate translation. Molecular Plant Pathology 7(3): 167-176.

Caldo, RA, D Nettleton and RP Wise. 2004. Interaction-dependent gene expression in Mla-specified response to barley powdery mildew. Plant Cell 16: 2514-2528.

Halterman, D and RP Wise. 2004. A single amino acid substitution in the sixth leucine-rich repeat of barley MLA6 and MLA13 alleviates dependence on RAR1 for disease resistance signaling. Plant Journal 38: 215-226.

Close, TJ, S Wanamaker, R Caldo, SM Turner, DA Ashlock, JA Dickerson, RA Wing, GJ Muehlbauer, A Kleinhofs and RP Wise. 2004. A new resource for cereal genomics: 22K barley GeneChip comes of age. Plant Physiology 134: 960-968.

Halterman, D, F Wei, and RP Wise. 2003. Powdery mildew induced Mla mRNAs are alternatively spliced and contain multiple upstream open reading frames. Plant Physiology 131: 558-567.

Wei, F, R Wing, and RP Wise. 2002. Genome dynamics and evolution of the Mla (powdery mildew) resistance locus in barley. Plant Cell 14: 1903-1917.

 

Seminars and Brown Bags

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Department Highlights

Beattie Lab

Exploring the role of water limitation in plant defense and in the ecology of foliar bacterial pathogens

"Does plant defense involve starving bacteria for water?
How do plant defense responses ultimately limit the growth of bacterial pathogens? Using bacterial bioreporters that report on the water status of bacterial cells in planta, we have shown that the bacterial pathogen Pseudomonas syringae pv. tomato experiences a rapid decrease in water availability following invasion of resistant Arabidopsis thaliana plants. " Read More