Publications

Export 101 results:
2020
Kanodia P, Vijayapalani P, Srivastava R, Bi R, Liu P, W. Miller A, et al.. Control of translation during the unfolded protein response in maize seedlings: Life without PERKs. Plant Direct [Internet]. 2020;4. https://onlinelibrary.wiley.com/doi/full/10.1002/pld3.241
Kanodia P, Prasanth KR, Roa-Linares VC, Bradrick SS, Garcia-Blanco MA, Miller WA. A rapid and simple quantitative method for specific Detection of Smaller Co-terminal RNA by PCR (DeSCo-PCR): Application to the detection of viral subgenomic RNAs. RNA. 2020;26:888-901. PDF icon desco-crpulkitrna20.pdf (3.84 MB)
Carino EJ, Scheets K, W. Miller A. The RNA of maize chlorotic mottle virus - an obligatory component of maize lethal necrosis disease - is translated via a variant panicum mosaic virus-like cap-independent translation element. J Virol [Internet]. 2020;94(22):e01005-20. https://doi.org/10.1128/JVI.01005-20
2019
Kraft JJ, Peterson MS, Cho SKi, Wang Z, Hui A, Rakotondrafara AM, et al.. The 3' Untranslated Region of a Plant Viral RNA Directs Efficient Cap-Independent Translation in Plant and Mammalian Systems. Pathogens [Internet]. 2019;8(1). https://www.mdpi.com/2076-0817/8/1/28
W. Miller A, Dinesh-Kumar SP. Commentary: A new mechanism for translational control in plants. FEBS Journal [Internet]. 2019;. https://febs.onlinelibrary.wiley.com/doi/full/10.1111/febs.15022PDF icon snrk1translationcommentarymillerfebsj19.pdf (248.28 KB)
Dolezal AG, Carrillo-Tripp J, Judd T, Miller WA, Bonning BC, Toth AL. Interacting stressors matter: diet quality and virus infection in honeybee health. Royal Society Open Science [Internet]. 2019;6. https://royalsocietypublishing.org/doi/full/10.1098/rsos.181803PDF icon rsos.181803.pdf (658.55 KB)
2018
Xu Y, Ju H-J, DeBlasio S, Carino EJ, Johnson R, MacCoss MJ, et al.. A stem-loop structure in Potato leafroll virus open reading frame 5 (ORF5) is essential for readthrough translation of the coat protein ORF stop codon 700 bases upstream. J. Virol. [Internet]. 2018;92. http://jvi.asm.org/content/92/11/e01544-17.full
2017
Feng Y, Krueger EN, Liu S, Dorman K, Bonning BC, Miller WA. Discovery of known and novel viral genomes in soybean aphid by deep sequencing. Phytobiomes. 2017;1:1-10.
Zhao P, Liu Q, Miller WA, Goss DG. Eukaryotic translation initiation factor 4G (eIF4G) coordinates interactions with eIF4A, eIF4B, and eIF4E in binding and translation of the barley yellow dwarf virus 3' cap-independent translation element (BTE). J. Biol. Chem. 2017;292:5921-5931.
Miras M, Miller WA, Truniger V, Aranda MA. Non-canonical translation in plant RNA viruses. Front. Plant Sci. 2017;8.
Doumayrou J, Sheber M, Bonning BC, W. Miller A. Quantification of Pea enation mosaic virus 1 and 2 during infection of Pisum sativum by one step real-time RT-PCR. J Virol Methods. 2017;240:63-68.
2016
Carrillo-Tripp J, Dolezal AG, Goblirsch MJ, Miller WA, Toth AL, Bonning BC. In vivo and in vitro infection dynamics of honey bee viruses. Scientific Reports. 2016;6:22265.
Dolezal AG, Carrillo-Tripp J, Miller WA, Bonning BC, Toth AL. Intensively cultivated landscape and Varroa mite infestation are associated with reduced honey bee nutritional state. PLoS ONE. 2016;11:e0153531.
Miller WA, Shen R, Staplin WR, Kanodia P. Noncoding RNAs of plant viruses and viroids: Sponges of host translation and RNA interference machinery. Molecular Plant-Microbe Interactions. 2016;29:156-164.
Dolezal AG, Carrillo-Tripp J, Miller WA, Bonning BC, Toth AL. Pollen contaminated with field-relevant levels of cyhalothrin affects honey bee survival, nutritional physiology, and pollen consumption behavior. Journal of Economic Entomology. 2016;109:41-48.
Doumayrou J, Sheber M, Bonning BC, W. Miller A. Role of Pea Enation Mosaic Virus Coat Protein in the Host Plant and Aphid Vector. Viruses. 2016;8(11).
2015
Miller WA, Jackson J, Feng Y. Cis- and trans-regulation of luteovirus gene expression by the 3' end of the viral genome. Virus Res. 2015/04/11th ed. 2015;206:37–45.
Smirnova E, Firth AE, Miller WA, Scheidecker D, Brault V, Reinbold C, et al.. Discovery of a Small Non-AUG-Initiated ORF in Poleroviruses and Luteoviruses That Is Required for Long-Distance Movement. PLoS Pathog. 2015/05/07th ed. 2015;11:e1004868.
Almasi R, Miller WA, Ziegler-Graff V. Mild and severe cereal yellow dwarf viruses differ in silencing suppressor efficiency of the P0 protein. Virus Research. 2015;208:199-206.
Brinton MA, Miller WA. Positive strand RNA virus replication: It depends on the ends. Virus Research. 2015;206:1-2.
Sharma SD, Kraft JJ, Miller WA, Goss DJ. Recruitment of the 40S Ribosome Subunit to the 3'-Untranslated Region (UTR) of a Viral mRNA, via the eIF4 Complex, Facilitates Cap-independent Translation. J Biol Chem. 2015/03/21th ed. 2015;290:11268-81.
2014
Liu S, Vijayendran D, Carrillo-Tripp J, Miller WA, Bonning BC. Analysis of new aphid lethal paralysis virus (ALPV) isolates suggests evolution of two ALPV species. J Gen Virol. 2014/08/30th ed. 2014;95:2809-19.
Pal N, Boyapalle S, Beckett RJ, Miller WA, Bonning BC. A baculovirus-expressed dicistrovirus that is infectious to aphids [CORRECTION]. J Virol. 2014/02/26th ed. 2014;88:3610.
Miller WA, Carrillo-Tripp J, Bonning BC, Dolezal AG, Toth AL. Conclusive evidence of replication of a plant virus in honeybees is lacking. MBio. 2014/05/29th ed. 2014;5:e00985-14.
Miras M, Sempere RN, Kraft JJ, Miller WA, Aranda MA, Truniger V. Interfamilial recombination between viruses led to acquisition of a novel translation-enhancing RNA element that allows resistance breaking. New Phytol. 2014/01/01th ed. 2014;202:233-46.
Carrillo-Tripp J, Krueger EN, Harrison RL, Toth AL, Miller WA, Bonning BC. Lymantria dispar iflavirus 1 (LdIV1), a new model to study iflaviral persistence in lepidopterans. J Gen Virol. 2014/07/06th ed. 2014;95:2285-96.
Saiyasombat R, Carrillo-Tripp J, Miller WA, Bredenbeek PJ, Blitvich BJ. Substitution of the premembrane and envelope protein genes of Modoc virus with the homologous sequences of West Nile virus generates a chimeric virus that replicates in vertebrate but not mosquito cells. Virol J. 2014/08/26th ed. 2014;11:150.
Bonning BC, Pal N, Liu S, Wang Z, Sivakumar S, Dixon PM, et al.. Toxin delivery by the coat protein of an aphid-vectored plant virus provides plant resistance to aphids. Nat Biotechnol. 2013/12/10th ed. 2014;32:102-5.
2013
Simon AE, Miller WA. 3' cap-independent translation enhancers of plant viruses. Annu Rev Microbiol. 2013/05/21th ed. 2013;67:21-42.
Kraft JJ, Treder K, Peterson MS, Miller WA. Cation-dependent folding of 3' cap-independent translation elements facilitates interaction of a 17-nucleotide conserved sequence with eIF4G. Nucleic Acids Res. 2013/01/31th ed. 2013;41:3398-413.
Krueger EN, Beckett RJ, Gray SM, Miller WA. The complete nucleotide sequence of the genome of Barley yellow dwarf virus-RMV reveals it to be a new Polerovirus distantly related to other yellow dwarf viruses. Front Microbiol. 2013/07/28th ed. 2013;4:205.
2012
Vijayapalani P, Maeshima M, Nagasaki-Takekuchi N, Miller WA. Interaction of the trans-frame potyvirus protein P3N-PIPO with host protein PCaP1 facilitates potyvirus movement. PLoS Pathog. 2012/04/19th ed. 2012;8:e1002639.
Fan Q, Treder K, Miller WA. Untranslated regions of diverse plant viral RNAs vary greatly in translation enhancement efficiency. BMC Biotechnol. 2012/05/09th ed. 2012;12:22.
2011
Wang Z, Parisien M, Scheets K, Miller WA. The cap-binding translation initiation factor, eIF4E, binds a pseudoknot in a viral cap-independent translation element. Structure. 2011/06/08th ed. 2011;19:868-80.
Kraft JJ, Hoy JA, Miller WA. Crystallization and preliminary X-ray diffraction analysis of the barley yellow dwarf virus cap-independent translation element. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011/05/06th ed. 2011;67:561-4.
2010
Bonning BC, Miller WA. Dicistroviruses. Annu Rev Entomol. 2009/12/08th ed. 2010;55:129-50.
Liu S, Sivakumar S, Sparks WO, Miller WA, Bonning BC. A peptide that binds the pea aphid gut impedes entry of Pea enation mosaic virus into the aphid hemocoel. Virology. 2010/03/13th ed. 2010;401:107-16.
Wang Z, Kraft JJ, Hui AY, Miller WA. Structural plasticity of Barley yellow dwarf virus-like cap-independent translation elements in four genera of plant viral RNAs. Virology. 2010/04/16th ed. 2010;402:177-86.
2009
Sivakumar S, Wang Z, Harrison RL, Liu S, Miller WA, Bonning BC. Baculovirus-expressed virus-like particles of Pea enation mosaic virus vary in size and encapsidate baculovirus mRNAs. Virus Res. 2008/11/18th ed. 2009;139:54-63.
Soto V, Dorman KS, Miller WA, Farfan-Ale JA, Lorono-Pino MA, Garcia-Rejon JE, et al.. Complete nucleotide sequences of the small and medium RNA genome segments of Kairi virus (family Bunyaviridae). Arch Virol. 2009/08/04th ed. 2009;154:1555-8.
Liu S, Sivakumar S, Wang Z, Bonning BC, Miller WA. The readthrough domain of pea enation mosaic virus coat protein is not essential for virus stability in the hemolymph of the pea aphid. Arch Virol. 2009/02/26th ed. 2009;154:469-79.
Wang Z, Treder K, Miller WA. Structure of a viral cap-independent translation element that functions via high affinity binding to the eIF4E subunit of eIF4F. J Biol Chem. 2009/03/12th ed. 2009;284:14189-202.
2008
Treder K, Kneller EL, Allen EM, Wang Z, Browning KS, Miller WA. The 3' cap-independent translation element of Barley yellow dwarf virus binds eIF4F via the eIF4G subunit to initiate translation. RNA. 2007/11/21th ed. 2008;14:134-47.
Rakotondrafara AM, Miller WA. In vitro analysis of translation enhancers. Methods Mol Biol. 2008/03/29th ed. 2008;451:113-24.
Staplin WR, Miller WA. In vivo analyses of viral RNA translation. Methods Mol Biol. 2008/03/29th ed. 2008;451:99-112.
Boyapalle S, Beckett RJ, Pal N, Miller WA, Bonning BC. Infectious genomic RNA of Rhopalosiphum padi virus transcribed in vitro from a full-length cDNA clone. Virology. 2008/03/15th ed. 2008;375:401-11.
Chung BY, Miller WA, Atkins JF, Firth AE. An overlapping essential gene in the Potyviridae. Proc Natl Acad Sci USA. 2008/04/15th ed. 2008;105:5897-902.
Salem NM, Miller WA, Rowhani A, Golino DA, Moyne AL, Falk BW. Rose spring dwarf-associated virus has RNA structural and gene-expression features like those of Barley yellow dwarf virus. Virology. 2008/03/11th ed. 2008;375:354-60.
2007
Miller WA, Wang Z, Treder K. The amazing diversity of cap-independent translation elements in the 3'-untranslated regions of plant viral RNAs. Biochem Soc Trans. 2007/11/23th ed. 2007;35:1629-33.
Pal N, Boyapalle S, Beckett R, Miller WA, Bonning BC. A baculovirus-expressed dicistrovirus that is infectious to aphids. J Virol. 2007/06/29th ed. 2007;81:9339-45.

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