Publications

Export 101 results:
Journal Article
Barry JK, Miller WA. A -1 ribosomal frameshift element that requires base pairing across four kilobases suggests a mechanism of regulating ribosome and replicase traffic on a viral RNA. Proc Natl Acad Sci USA. 2002/08/01nd ed. 2002;99:11133-8.
Treder K, Kneller EL, Allen EM, Wang Z, Browning KS, Miller WA. The 3' cap-independent translation element of Barley yellow dwarf virus binds eIF4F via the eIF4G subunit to initiate translation. RNA. 2007/11/21th ed. 2008;14:134-47.
Simon AE, Miller WA. 3' cap-independent translation enhancers of plant viruses. Annu Rev Microbiol. 2013/05/21th ed. 2013;67:21-42.
Kraft JJ, Peterson MS, Cho SKi, Wang Z, Hui A, Rakotondrafara AM, et al.. The 3' Untranslated Region of a Plant Viral RNA Directs Efficient Cap-Independent Translation in Plant and Mammalian Systems. Pathogens [Internet]. 2019;8(1). https://www.mdpi.com/2076-0817/8/1/28
Shen R, Miller WA. The 3' untranslated region of tobacco necrosis virus RNA contains a barley yellow dwarf virus-like cap-independent translation element. J Virol. 2004/04/14th ed. 2004;78:4655-64.
Koev G, Liu S, Beckett R, Miller WA. The 3'-terminal structure required for replication of Barley yellow dwarf virus RNA contains an embedded 3' end. Virology. 2002/03/07nd ed. 2002;292:114-26.
Miller WA, Silver SL. Alternative tertiary structure attenuates self-cleavage of the ribozyme in the satellite RNA of barley yellow dwarf virus. Nucleic Acids Res. 1991/10/11st ed. 1991;19:5313-20.
Miller WA, Wang Z, Treder K. The amazing diversity of cap-independent translation elements in the 3'-untranslated regions of plant viral RNAs. Biochem Soc Trans. 2007/11/23th ed. 2007;35:1629-33.
Liu S, Vijayendran D, Carrillo-Tripp J, Miller WA, Bonning BC. Analysis of new aphid lethal paralysis virus (ALPV) isolates suggests evolution of two ALPV species. J Gen Virol. 2014/08/30th ed. 2014;95:2809-19.
Chay CA, Gunasinge UB, Dinesh-Kumar SP, Miller WA, Gray SM. Aphid transmission and systemic plant infection determinants of barley yellow dwarf luteovirus-PAV are contained in the coat protein readthrough domain and 17-kDa protein, respectively. Virology. 1996/05/01th ed. 1996;219:57-65.
Pal N, Boyapalle S, Beckett R, Miller WA, Bonning BC. A baculovirus-expressed dicistrovirus that is infectious to aphids. J Virol. 2007/06/29th ed. 2007;81:9339-45.
Pal N, Boyapalle S, Beckett RJ, Miller WA, Bonning BC. A baculovirus-expressed dicistrovirus that is infectious to aphids [CORRECTION]. J Virol. 2014/02/26th ed. 2014;88:3610.
Sivakumar S, Wang Z, Harrison RL, Liu S, Miller WA, Bonning BC. Baculovirus-expressed virus-like particles of Pea enation mosaic virus vary in size and encapsidate baculovirus mRNAs. Virus Res. 2008/11/18th ed. 2009;139:54-63.
Miller WA, Liu S, Beckett R. Barley yellow dwarf virus: Luteoviridae or Tombusviridae?. Mol Plant Pathol. 2002/07/01nd ed. 2002;3:177-83.
Allen E, Wang S, Miller WA. Barley yellow dwarf virus RNA requires a cap-independent translation sequence because it lacks a 5' cap. Virology. 1999/01/27th ed. 1999;253:139-44.
Miller WA, Rasochova L. Barley yellow dwarf viruses. Annu Rev Phytopathol. 1997/01/01th ed. 1997;35:167-90.
Guo L, Allen EM, Miller WA. Base-pairing between untranslated regions facilitates translation of uncapped, nonpolyadenylated viral RNA. Mol Cell. 2001/06/08st ed. 2001;7:1103-9.
Wang Z, Parisien M, Scheets K, Miller WA. The cap-binding translation initiation factor, eIF4E, binds a pseudoknot in a viral cap-independent translation element. Structure. 2011/06/08th ed. 2011;19:868-80.
Kneller EL, Rakotondrafara AM, Miller WA. Cap-independent translation of plant viral RNAs. Virus Res. 2005/12/20th ed. 2006;119:63-75.
Kraft JJ, Treder K, Peterson MS, Miller WA. Cation-dependent folding of 3' cap-independent translation elements facilitates interaction of a 17-nucleotide conserved sequence with eIF4G. Nucleic Acids Res. 2013/01/31th ed. 2013;41:3398-413.
Song SI, Miller WA. Cis and trans requirements for rolling circle replication of a satellite RNA. J Virol. 2004/03/03th ed. 2004;78:3072-82.
Miller WA, Jackson J, Feng Y. Cis- and trans-regulation of luteovirus gene expression by the 3' end of the viral genome. Virus Res. 2015/04/11th ed. 2015;206:37–45.
W. Miller A, Dinesh-Kumar SP. Commentary: A new mechanism for translational control in plants. FEBS Journal [Internet]. 2019;. https://febs.onlinelibrary.wiley.com/doi/full/10.1111/febs.15022PDF icon snrk1translationcommentarymillerfebsj19.pdf (248.28 KB)
Krueger EN, Beckett RJ, Gray SM, Miller WA. The complete nucleotide sequence of the genome of Barley yellow dwarf virus-RMV reveals it to be a new Polerovirus distantly related to other yellow dwarf viruses. Front Microbiol. 2013/07/28th ed. 2013;4:205.
Soto V, Dorman KS, Miller WA, Farfan-Ale JA, Lorono-Pino MA, Garcia-Rejon JE, et al.. Complete nucleotide sequences of the small and medium RNA genome segments of Kairi virus (family Bunyaviridae). Arch Virol. 2009/08/04th ed. 2009;154:1555-8.
Jayaram C, Hill JH, Miller WA. Complete nucleotide sequences of two soybean mosaic virus strains differentiated by response of soybean containing the Rsv resistance gene. J Gen Virol. 1992/08/01nd ed. 1992;73 ( Pt 8):2067-77.
Miller WA, Carrillo-Tripp J, Bonning BC, Dolezal AG, Toth AL. Conclusive evidence of replication of a plant virus in honeybees is lacking. MBio. 2014/05/29th ed. 2014;5:e00985-14.
Dinesh-Kumar SP, Miller WA. Control of start codon choice on a plant viral RNA encoding overlapping genes. Plant Cell. 1993/06/01rd ed. 1993;5:679-92.
Kanodia P, Vijayapalani P, Srivastava R, Bi R, Liu P, W. Miller A, et al.. Control of translation during the unfolded protein response in maize seedlings: Life without PERKs. Plant Direct [Internet]. 2020;4. https://onlinelibrary.wiley.com/doi/full/10.1002/pld3.241
Kraft JJ, Hoy JA, Miller WA. Crystallization and preliminary X-ray diffraction analysis of the barley yellow dwarf virus cap-independent translation element. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011/05/06th ed. 2011;67:561-4.
Bonning BC, Miller WA. Dicistroviruses. Annu Rev Entomol. 2009/12/08th ed. 2010;55:129-50.
Smirnova E, Firth AE, Miller WA, Scheidecker D, Brault V, Reinbold C, et al.. Discovery of a Small Non-AUG-Initiated ORF in Poleroviruses and Luteoviruses That Is Required for Long-Distance Movement. PLoS Pathog. 2015/05/07th ed. 2015;11:e1004868.
Feng Y, Krueger EN, Liu S, Dorman K, Bonning BC, Miller WA. Discovery of known and novel viral genomes in soybean aphid by deep sequencing. Phytobiomes. 2017;1:1-10.
Banerjee AK, Chatterjee M, Yu Y, Suh SG, Miller WA, Hannapel DJ. Dynamics of a mobile RNA of potato involved in a long-distance signaling pathway. Plant Cell. 2006/12/26th ed. 2006;18:3443-57.
Zhao P, Liu Q, Miller WA, Goss DG. Eukaryotic translation initiation factor 4G (eIF4G) coordinates interactions with eIF4A, eIF4B, and eIF4E in binding and translation of the barley yellow dwarf virus 3' cap-independent translation element (BTE). J. Biol. Chem. 2017;292:5921-5931.
Koev G, Mohan BR, Dinesh-Kumar SP, Torbert KA, Somers DA, Miller WA. Extreme Reduction of Disease in Oats Transformed with the 5' Half of the Barley Yellow Dwarf Virus-PAV Genome. Phytopathology. 2008/10/24th ed. 1998;88:1013-9.
Mohan BR, Dinesh-Kumar SP, Miller WA. Genes and cis-acting sequences involved in replication of barley yellow dwarf virus-PAV RNA. Virology. 1995/09/10th ed. 1995;212:186-95.
Gadani F, Mansky LM, Medici R, Miller WA, Hill JH. Genetic engineering of plants for virus resistance. Arch Virol. 1990/01/01th ed. 1990;115:1-21.
Miller WA, Koev G. Getting a handle on RNA virus recombination. Trends Microbiol. 1998/12/10th ed. 1998;6:421-3.
Boyapalle S, Pal N, Miller WA, Bonning BC. A glassy-winged sharpshooter cell line supports replication of Rhopalosiphum padi virus (Dicistroviridae). J Invertebr Pathol. 2006/11/23th ed. 2007;94:130-9.
Rakotondrafara AM, Miller WA. In vitro analysis of translation enhancers. Methods Mol Biol. 2008/03/29th ed. 2008;451:113-24.
Staplin WR, Miller WA. In vivo analyses of viral RNA translation. Methods Mol Biol. 2008/03/29th ed. 2008;451:99-112.
Carrillo-Tripp J, Dolezal AG, Goblirsch MJ, Miller WA, Toth AL, Bonning BC. In vivo and in vitro infection dynamics of honey bee viruses. Scientific Reports. 2016;6:22265.
Boyapalle S, Beckett RJ, Pal N, Miller WA, Bonning BC. Infectious genomic RNA of Rhopalosiphum padi virus transcribed in vitro from a full-length cDNA clone. Virology. 2008/03/15th ed. 2008;375:401-11.
Dolezal AG, Carrillo-Tripp J, Miller WA, Bonning BC, Toth AL. Intensively cultivated landscape and Varroa mite infestation are associated with reduced honey bee nutritional state. PLoS ONE. 2016;11:e0153531.
Dolezal AG, Carrillo-Tripp J, Judd T, Miller WA, Bonning BC, Toth AL. Interacting stressors matter: diet quality and virus infection in honeybee health. Royal Society Open Science [Internet]. 2019;6. https://royalsocietypublishing.org/doi/full/10.1098/rsos.181803PDF icon rsos.181803.pdf (658.55 KB)
Vijayapalani P, Maeshima M, Nagasaki-Takekuchi N, Miller WA. Interaction of the trans-frame potyvirus protein P3N-PIPO with host protein PCaP1 facilitates potyvirus movement. PLoS Pathog. 2012/04/19th ed. 2012;8:e1002639.
Miras M, Sempere RN, Kraft JJ, Miller WA, Aranda MA, Truniger V. Interfamilial recombination between viruses led to acquisition of a novel translation-enhancing RNA element that allows resistance breaking. New Phytol. 2014/01/01th ed. 2014;202:233-46.
Brown CM, Dinesh-Kumar SP, Miller WA. Local and distant sequences are required for efficient readthrough of the barley yellow dwarf virus PAV coat protein gene stop codon. J Virol . 1996/09/01th ed. 1996;70:5884-92.
Miller WA, White KA. Long-distance RNA-RNA interactions in plant virus gene expression and replication. Annu Rev Phytopathol. 2006/05/18th ed. 2006;44:447-67.

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